Detailed information of matrix profile MA0965.1

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Profile summary
Name: BIM2
Matrix ID: MA0965.1
Class: Basic
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 15680330
Uniprot ID: Q9CAA4  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 244 167 53 962 22 92 14 49 317 205 ]
C [ 261 143 897 0 885 0 24 1 373 290 ]
G [ 290 373 1 24 0 885 0 897 143 261 ]
T [ 205 317 49 14 92 22 962 53 167 244 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0965.1 MA0965 1 BIM2 Arabidopsis thaliana
bHLH Basic
MA0965.2 MA0965 2 BIM2 Arabidopsis thaliana
bHLH Basic
MA0965.3 MA0965 3 BIM2 Arabidopsis thaliana
bHLH Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0301.1

ChIP-seq Centrality
-log(P-value): 32018.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0301.1

ChIP-seq Centrality
-log(P-value): 31920.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: