Detailed information of matrix profile MA0877.1

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Profile summary
Name: Barhl1
Matrix ID: MA0877.1
Class: Homeo
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P63157  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 2325 1236 677 6265 6265 3 181 6265 1858 1304 ]
C [ 1195 1839 6265 1937 1950 39 53 0 1121 2123 ]
G [ 1760 2053 337 2017 418 0 0 41 2159 1623 ]
T [ 985 1136 1763 1881 3241 6265 6265 590 1127 1214 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0877.1 MA0877 1 Barhl1 Mus musculus
NK Homeo
MA0877.2 MA0877 2 BARHL1 Homo sapiens
NK Homeo
MA0877.3 MA0877 3 BARHL1 Homo sapiens
NK Homeo
MA0877.4 MA0877 4 BARHL1 Homo sapiens
NK Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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