Detailed information of matrix profile MA0877.1

  1. Home
  2. Matrix > MA0877.1

Profile summary
Name: Barhl1
Matrix ID: MA0877.1
Class: Homeo
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P63157  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 1214 1127 590 6265 6265 3241 1881 1763 1136 985 ]
C [ 1623 2159 41 0 0 418 2017 337 2053 1760 ]
G [ 2123 1121 0 53 39 1950 1937 6265 1839 1195 ]
T [ 1304 1858 6265 181 3 6265 6265 677 1236 2325 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0877.1 MA0877 1 Barhl1 Mus musculus
NK Homeo
MA0877.2 MA0877 2 BARHL1 Homo sapiens
NK Homeo
MA0877.3 MA0877 3 BARHL1 Homo sapiens
NK Homeo
MA0877.4 MA0877 4 BARHL1 Homo sapiens
NK Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: