Detailed information of matrix profile MA0844.1

  1. Home
  2. Matrix > MA0844.1

Profile summary
Name: XBP1
Matrix ID: MA0844.1
Class: Basic
Family: XBP-1-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 15598891
Uniprot ID: P17861  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 4396 3270 1104 974 3699 167 7840 9 52 0 380 8004 230 989 ]
C [ 558 1017 1191 367 3809 7169 17 7356 0 16 7264 48 2273 6313 ]
G [ 801 2413 2669 9168 59 222 276 2 11353 8 47 173 3157 1217 ]
T [ 2467 1780 3999 2321 247 442 118 10 10 9107 35 92 6389 1250 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0844.1 MA0844 1 XBP1 Homo sapiens
XBP-1-related Basic
MA0844.2 MA0844 2 XBP1 Homo sapiens
XBP-1-related Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0214.1

ChIP-seq Centrality
-log(P-value): 2134.98

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0214.1

ChIP-seq Centrality
-log(P-value): 2944.27

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: