Detailed information of matrix profile MA0830.1

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Profile summary
Name: TCF4
Matrix ID: MA0830.1
Class: Basic
Family: E2A
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 10594029
Uniprot ID: P15884  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 4738 7822 6 20335 0 56 117 27 374 5305 ]
C [ 8284 2465 20335 0 20335 20335 0 5 7336 4812 ]
G [ 2128 9640 0 0 2315 387 0 20335 6324 4838 ]
T [ 5185 409 13 0 1334 0 20335 25 6301 5380 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0830.1 MA0830 1 TCF4 Homo sapiens
E2A Basic
MA0830.2 MA0830 2 TCF4 Homo sapiens
E2A Basic
MA0830.3 MA0830 3 TCF4 Homo sapiens
E2A Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0601.1

ChIP-seq Centrality
-log(P-value): 30077.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0601.1

ChIP-seq Centrality
-log(P-value): 30159.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: