Detailed information of matrix profile MA0798.2

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Profile summary
Name: RFX3
Matrix ID: MA0798.2
Class: Fork
Family: RFX-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 20378718
Uniprot ID: P48380  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 552 884 165 125 3465 62 2145 321 279 3875 4140 70 1362 1141 ]
C [ 1117 748 3574 3881 414 222 35 41 3597 78 78 4093 1370 966 ]
G [ 432 1641 230 46 150 100 2115 3940 144 263 91 46 927 1678 ]
T [ 2244 1072 376 293 316 3961 50 43 325 129 36 136 686 560 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0798.1 MA0798 1 RFX3 Homo sapiens
RFX-related Fork
MA0798.2 MA0798 2 RFX3 Homo sapiens
RFX-related Fork
MA0798.3 MA0798 3 RFX3 Homo sapiens
RFX-related Fork
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0577.2

ChIP-seq Centrality
-log(P-value): 6635.42

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0577.2

ChIP-seq Centrality
-log(P-value): 6586.38

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: