Detailed information of matrix profile MA0798.2

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Profile summary
Name: RFX3
Matrix ID: MA0798.2
Class: Fork
Family: RFX-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 20378718
Uniprot ID: P48380  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 560 686 136 36 129 325 43 50 3961 316 293 376 1072 2244 ]
C [ 1678 927 46 91 263 144 3940 2115 100 150 46 230 1641 432 ]
G [ 966 1370 4093 78 78 3597 41 35 222 414 3881 3574 748 1117 ]
T [ 1141 1362 70 4140 3875 279 321 2145 62 3465 125 165 884 552 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0798.1 MA0798 1 RFX3 Homo sapiens
RFX-related Fork
MA0798.2 MA0798 2 RFX3 Homo sapiens
RFX-related Fork
MA0798.3 MA0798 3 RFX3 Homo sapiens
RFX-related Fork
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0577.2

ChIP-seq Centrality
-log(P-value): 6635.42

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0577.2

ChIP-seq Centrality
-log(P-value): 6586.38

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: