Detailed information of matrix profile MA0797.1

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Profile summary
Name: TGIF2
Matrix ID: MA0797.1
Class: Homeo
Family: TALE-type
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8537382
Uniprot ID: Q9GZN2  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 477 97 11801 127 11801 324 1501 71 150 601 70 11801 ]
C [ 421 48 34 11801 25 262 7459 410 77 621 11801 172 ]
G [ 153 11801 396 51 270 11801 4341 57 11801 123 136 395 ]
T [ 11801 52 155 156 41 2690 91 11801 83 11801 113 420 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0797.1 MA0797 1 TGIF2 Homo sapiens
TALE-type Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0790.1

ChIP-seq Centrality
-log(P-value): 871.561

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0790.1

ChIP-seq Centrality
-log(P-value): 873.979

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: