Detailed information of matrix profile MA0756.1

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Profile summary
Name: ONECUT2
Matrix ID: MA0756.1
Class: Homeo
Family: HD-CUT
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8887657
Uniprot ID: O95948  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 964 832 205 2378 22 0 5 2378 6 20 595 507 307 366 ]
C [ 237 238 105 0 1 1485 0 9 18 114 83 375 515 539 ]
G [ 526 576 84 14 2 16 2378 8 1 12 157 254 192 445 ]
T [ 651 1547 2378 20 2378 893 6 8 2378 2378 2378 2378 1363 1028 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0756.1 MA0756 1 ONECUT2 Homo sapiens
HD-CUT Homeo
MA0756.2 MA0756 2 ONECUT2 Homo sapiens
HD-CUT Homeo
MA0756.3 MA0756 3 ONECUT2 Homo sapiens
HD-CUT Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0546.1

ChIP-seq Centrality
-log(P-value): 3894.56

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0546.1

ChIP-seq Centrality
-log(P-value): 3938.27

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: