Detailed information of matrix profile MA0756.1

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Profile summary
Name: ONECUT2
Matrix ID: MA0756.1
Class: Homeo
Family: HD-CUT
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8887657
Uniprot ID: O95948  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 1028 1363 2378 2378 2378 2378 8 6 893 2378 20 2378 1547 651 ]
C [ 445 192 254 157 12 1 8 2378 16 2 14 84 576 526 ]
G [ 539 515 375 83 114 18 9 0 1485 1 0 105 238 237 ]
T [ 366 307 507 595 20 6 2378 5 0 22 2378 205 832 964 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0756.1 MA0756 1 ONECUT2 Homo sapiens
HD-CUT Homeo
MA0756.2 MA0756 2 ONECUT2 Homo sapiens
HD-CUT Homeo
MA0756.3 MA0756 3 ONECUT2 Homo sapiens
HD-CUT Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0546.1

ChIP-seq Centrality
-log(P-value): 3894.56

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0546.1

ChIP-seq Centrality
-log(P-value): 3938.27

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: