Detailed information of matrix profile MA0719.1

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Profile summary
Name: RHOXF1
Matrix ID: MA0719.1
Class: Homeo
Family: Paired-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: Q8NHV9  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 3224 2837 5543 10916 0 0 0 3223 ]
C [ 2644 0 0 0 0 10916 10916 3453 ]
G [ 1855 478 5373 0 3540 0 0 2117 ]
T [ 3193 10916 1367 0 7376 0 2275 2123 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0719.1 MA0719 1 RHOXF1 Homo sapiens
Paired-related Homeo
MA0719.2 MA0719 2 RHOXF1 Homo sapiens
Paired-related Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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