Detailed information of matrix profile MA0700.2

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Profile summary
Name: LHX2
Matrix ID: MA0700.2
Class: Homeo
Family: HD-LIM
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 23332764
Uniprot ID: P50458  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 2374 2264 898 44 5790 6022 129 67 6275 2167 1934 ]
C [ 988 949 3412 5612 71 101 58 5 13 976 1343 ]
G [ 1261 1252 1045 37 52 77 64 5 6 1463 1035 ]
T [ 1710 1868 978 640 420 133 6082 6256 39 1727 2021 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0700.1 MA0700 1 LHX2 Homo sapiens
HD-LIM Homeo
MA0700.2 MA0700 2 LHX2 Homo sapiens
HD-LIM Homeo
MA0700.3 MA0700 3 LHX2 Homo sapiens
HD-LIM Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0185.2

ChIP-seq Centrality
-log(P-value): 3102.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0185.2

ChIP-seq Centrality
-log(P-value): 3069.65

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: