Detailed information of matrix profile MA0685.1

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Profile summary
Name: SP4
Matrix ID: MA0685.1
Class: C2H2
Family: Three-zinc
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 23019068
Uniprot ID: Q02446  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 621 2173 2600 939 260 2 3004 2 10 2 3 0 1840 113 1140 582 967 ]
C [ 1405 156 146 6 4443 4492 991 4662 14 4681 4732 4667 2430 4276 897 1206 1180 ]
G [ 823 65 1639 4774 0 5 3 0 5444 4 2 3 9 21 234 363 556 ]
T [ 1622 1809 199 16 4 135 0 0 55 0 0 72 67 1067 3043 2078 1509 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0685.1 MA0685 1 SP4 Homo sapiens
Three-zinc C2H2
MA0685.2 MA0685 2 SP4 Homo sapiens
Three-zinc C2H2
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0591.1

ChIP-seq Centrality
-log(P-value): 2140.85

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0591.1

ChIP-seq Centrality
-log(P-value): 2015.56

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: