Detailed information of matrix profile MA0590.1

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Profile summary
Name: LFY
Matrix ID: MA0590.1
Class: LEAFY
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX-seq
Validation: 21515819
Uniprot ID: Q00958  
Source:
Comment: No

Sequence logo

Frequency matrix

         
A [ 32 266 56 20 126 228 10 0 94 35 10 19 8 50 4 360 325 80 199 ]
C [ 104 13 75 7 0 43 364 358 2 174 273 0 0 2 246 178 12 17 49 ]
G [ 49 17 12 178 246 2 0 0 273 174 2 358 364 43 0 7 75 13 104 ]
T [ 199 80 325 360 4 50 8 19 10 35 94 0 10 228 126 20 56 266 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0590.1 MA0590 1 LFY Arabidopsis thaliana
LEAFY
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0520.1

ChIP-seq Centrality
-log(P-value): 3213.13

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0520.1

ChIP-seq Centrality
-log(P-value): 3223.24

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: