Detailed information of matrix profile MA0589.1

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Profile summary
Name: WRKY1
Matrix ID: MA0589.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 8972846
Uniprot ID: Q9SI37  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 0 0 0 50 0 1 2 32 2 2 8 ]
C [ 0 0 0 0 50 47 5 11 7 28 20 ]
G [ 0 0 50 0 0 1 40 4 37 5 5 ]
T [ 50 50 0 0 0 1 3 3 4 14 13 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0589.1 MA0589 1 WRKY1 Arabidopsis thaliana
WRKY GCM
MA0589.2 MA0589 2 WRKY1 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: