Detailed information of matrix profile MA0586.2

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Profile summary
Name: SPL14
Matrix ID: MA0586.2
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 18302343
Uniprot ID: Q8RY95  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 125 23 0 0 0 583 0 302 239 164 148 ]
C [ 7 534 583 0 0 0 581 87 105 104 86 ]
G [ 74 0 0 583 0 0 0 129 113 83 104 ]
T [ 377 26 0 0 583 0 2 65 126 232 245 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0586.1 MA0586 1 SPL14 Arabidopsis thaliana
SBP C3H(C),C2HC
MA0586.2 MA0586 2 SPL14 Arabidopsis thaliana
SBP C3H(C),C2HC
MA0586.3 MA0586 3 SPL14 Arabidopsis thaliana
SBP C3H(C),C2HC
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0389.1

ChIP-seq Centrality
-log(P-value): 6627.65

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0389.1

ChIP-seq Centrality
-log(P-value): 6627.65

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: