Detailed information of matrix profile MA0563.2

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Profile summary
Name: SEP3
Matrix ID: MA0563.2
Class: MADS
Family: Type
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 19033361
Uniprot ID: O22456  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 19 1 77 12 19 0 9 11 9 0 ]
C [ 111 97 0 28 0 0 0 3 0 7 ]
G [ 5 1 0 5 5 0 24 22 138 114 ]
T [ 15 51 73 105 126 150 117 114 3 29 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0563.1 MA0563 1 SEP3 Arabidopsis thaliana
Type MADS
MA0563.2 MA0563 2 SEP3 Arabidopsis thaliana
Type MADS
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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