Detailed information of matrix profile MA0560.2

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Profile summary
Name: PIF3
Matrix ID: MA0560.2
Class: Basic
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 10797009
Uniprot ID: O80536  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 19 0 527 0 0 0 0 ]
C [ 399 527 0 409 0 0 0 ]
G [ 94 0 0 0 527 0 527 ]
T [ 15 0 0 118 0 527 0 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0560.1 MA0560 1 PIF3 Arabidopsis thaliana
bHLH Basic
MA0560.2 MA0560 2 PIF3 Arabidopsis thaliana
bHLH Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: