Detailed information of matrix profile MA0547.2

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Profile summary
Name: skn-1
Matrix ID: MA0547.2
Class: Basic
Family: Jun-related
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 23555279
Uniprot ID: P34707  
Source:
Comment: Class

Sequence logo

Frequency matrix

         
A [ 142 78 41 86 0 0 298 13 0 224 34 30 30 23 ]
C [ 21 0 28 22 0 318 0 5 301 26 16 55 39 62 ]
G [ 16 0 0 179 0 0 0 35 17 36 0 24 12 43 ]
T [ 139 240 249 31 318 0 20 265 0 32 268 209 237 190 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0547.1 MA0547 1 skn-1 Caenorhabditis elegans
Jun-related Basic
MA0547.2 MA0547 2 skn-1 Caenorhabditis elegans
Jun-related Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: