Detailed information of matrix profile MA0547.2

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Profile summary
Name: skn-1
Matrix ID: MA0547.2
Class: Basic
Family: Jun-related
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 23555279
Uniprot ID: P34707  
Source:
Comment: Class

Sequence logo

Frequency matrix

         
A [ 190 237 209 268 32 0 265 20 0 318 31 249 240 139 ]
C [ 43 12 24 0 36 17 35 0 0 0 179 0 0 16 ]
G [ 62 39 55 16 26 301 5 0 318 0 22 28 0 21 ]
T [ 23 30 30 34 224 0 13 298 0 0 86 41 78 142 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0547.1 MA0547 1 skn-1 Caenorhabditis elegans
Jun-related Basic
MA0547.2 MA0547 2 skn-1 Caenorhabditis elegans
Jun-related Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: