Detailed information of matrix profile MA0547.1

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Profile summary
Name: skn-1
Matrix ID: MA0547.1
Class: Basic
Family: Jun-related
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 23555279
Uniprot ID: P34707  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 136 142 78 41 86 0 0 298 13 0 224 34 30 30 23 ]
C [ 53 21 0 28 22 0 318 0 5 301 26 16 55 39 62 ]
G [ 37 16 0 0 179 0 0 0 35 17 36 0 24 12 43 ]
T [ 92 139 240 249 31 318 0 20 265 0 32 268 209 237 190 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0547.1 MA0547 1 skn-1 Caenorhabditis elegans
Jun-related Basic
MA0547.2 MA0547 2 skn-1 Caenorhabditis elegans
Jun-related Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0583.1

ChIP-seq Centrality
-log(P-value): 206.03

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0583.1

ChIP-seq Centrality
-log(P-value): 180.401

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: