Detailed information of matrix profile MA0512.1

  1. Home
  2. Matrix > MA0512.1

Profile summary
Name: Rxra
Matrix ID: MA0512.1
Class: Nuclear
Family: RXR-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 10669605
Uniprot ID: P28700  
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 1397 792 0 0 4122 1466 0 0 0 767 244 ]
C [ 1569 2336 0 0 643 3882 5348 471 2473 9 305 ]
G [ 742 1070 0 5348 583 0 0 0 252 418 4521 ]
T [ 1640 1150 5348 0 0 0 0 4877 2623 4154 278 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0512.1 MA0512 1 Rxra Mus musculus
RXR-related Nuclear
MA0512.2 MA0512 2 Rxra Mus musculus
RXR-related Nuclear
     

-log(P-value) = 2615.0

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: retinoid

Alias: NR2B1

Symbol: RXRA

Consensus:

Included Models:

GC Content: