Detailed information of matrix profile MA0512.1

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Profile summary
Name: Rxra
Matrix ID: MA0512.1
Class: Nuclear
Family: RXR-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 10669605
Uniprot ID: P28700  
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 278 4154 2623 4877 0 0 0 0 5348 1150 1640 ]
C [ 4521 418 252 0 0 0 583 5348 0 1070 742 ]
G [ 305 9 2473 471 5348 3882 643 0 0 2336 1569 ]
T [ 244 767 0 0 0 1466 4122 0 0 792 1397 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0512.1 MA0512 1 Rxra Mus musculus
RXR-related Nuclear
MA0512.2 MA0512 2 Rxra Mus musculus
RXR-related Nuclear
     

-log(P-value) = 2615.0

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: retinoid

Alias: NR2B1

Symbol: RXRA

Consensus:

Included Models:

GC Content: