Detailed information of matrix profile MA0505.1

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Profile summary
Name: Nr5a2
Matrix ID: MA0505.1
Class: Nuclear
Family: FTZF1related(NR5A)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 12853459
Uniprot ID: P45448  
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 306 346 155 122 888 0 0 0 3 4 1257 836 238 211 199 ]
C [ 454 740 90 12 61 1702 1663 23 0 74 23 366 990 336 634 ]
G [ 693 345 20 1568 584 0 0 0 14 1616 351 378 198 170 224 ]
T [ 249 271 1437 0 169 0 39 1679 1685 8 71 122 276 985 645 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0505.1 MA0505 1 Nr5a2 Mus musculus
FTZF1related(NR5A) Nuclear
MA0505.2 MA0505 2 Nr5A2 Mus musculus
FTZF1related(NR5A) Nuclear
MA0505.3 MA0505 3 Nr5A2 Mus musculus
FTZF1related(NR5A) Nuclear
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0081.1

ChIP-seq Centrality
-log(P-value): 935.204

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0081.1

ChIP-seq Centrality
-log(P-value): 870.948

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: