Detailed information of matrix profile MA0505.1

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Profile summary
Name: Nr5a2
Matrix ID: MA0505.1
Class: Nuclear
Family: FTZF1related(NR5A)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 12853459
Uniprot ID: P45448  
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 645 985 276 122 71 8 1685 1679 39 0 169 0 1437 271 249 ]
C [ 224 170 198 378 351 1616 14 0 0 0 584 1568 20 345 693 ]
G [ 634 336 990 366 23 74 0 23 1663 1702 61 12 90 740 454 ]
T [ 199 211 238 836 1257 4 3 0 0 0 888 122 155 346 306 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0505.1 MA0505 1 Nr5a2 Mus musculus
FTZF1related(NR5A) Nuclear
MA0505.2 MA0505 2 Nr5A2 Mus musculus
FTZF1related(NR5A) Nuclear
MA0505.3 MA0505 3 Nr5A2 Mus musculus
FTZF1related(NR5A) Nuclear
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0081.1

ChIP-seq Centrality
-log(P-value): 935.204

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0081.1

ChIP-seq Centrality
-log(P-value): 870.948

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: