Detailed information of matrix profile MA0500.1

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Profile summary
Name: Myog
Matrix ID: MA0500.1
Class: Basic
Family: MyoD/ASC-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 16437161
Uniprot ID: P12979  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 7838 11572 0 19356 0 67 0 0 2832 5343 4069 ]
C [ 2870 331 19356 0 0 16261 0 0 8524 3764 4770 ]
G [ 8648 7453 0 0 19356 3028 0 19356 5881 5168 7519 ]
T [ 0 0 0 0 0 0 19356 0 2119 5081 2998 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0500.1 MA0500 1 Myog Mus musculus
MyoD/ASC-related Basic
MA0500.2 MA0500 2 MYOG Homo sapiens
MyoD/ASC-related Basic
MA0500.3 MA0500 3 MYOG Homo sapiens
MyoD/ASC-related Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0069.1

ChIP-seq Centrality
-log(P-value): 11624.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0069.1

ChIP-seq Centrality
-log(P-value): 11569.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: