Detailed information of matrix profile MA0499.1

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Profile summary
Name: Myod1
Matrix ID: MA0499.1
Class: Basic
Family: MyoD/ASC-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 20412780
Uniprot ID: P10085  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 8305 6660 5117 10583 14764 0 24514 0 19 161 0 2859 7060 ]
C [ 4423 4319 5945 2905 654 24514 0 0 18072 0 0 11000 5003 ]
G [ 7657 11622 7591 11010 9087 0 0 24514 6423 0 24514 6513 5589 ]
T [ 4129 1913 5861 16 9 0 0 0 0 24353 0 4142 6862 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0499.1 MA0499 1 Myod1 Mus musculus
MyoD/ASC-related Basic
MA0499.2 MA0499 2 MYOD1 Homo sapiens
MyoD/ASC-related Basic
MA0499.3 MA0499 3 MYOD1 Homo sapiens
MyoD/ASC-related Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0068.1

ChIP-seq Centrality
-log(P-value): 22973.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0068.1

ChIP-seq Centrality
-log(P-value): 22904.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: