Detailed information of matrix profile MA0141.3

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Profile summary
Name: ESRRB
Matrix ID: MA0141.3
Class: Nuclear
Family: Steroid
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18555785
Uniprot ID: O95718  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 108 9 1746 1746 3 1 6 2 1746 702 692 ]
C [ 373 1746 1 1 2 4 11 1746 0 256 328 ]
G [ 75 255 0 3 1746 1746 8 1 56 42 189 ]
T [ 1746 7 4 0 1 3 1746 15 3 1045 537 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0141.1 MA0141 1 Esrrb Mus musculus
Steroid Nuclear
MA0141.2 MA0141 2 Esrrb Mus musculus
Steroid Nuclear
MA0141.3 MA0141 3 ESRRB Homo sapiens
Steroid Nuclear
MA0141.4 MA0141 4 ESRRB Homo sapiens
Steroid Nuclear
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0029.1

ChIP-seq Centrality
-log(P-value): 11938.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0029.1

ChIP-seq Centrality
-log(P-value): 12049.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: