Detailed information of matrix profile MA0065.3

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Profile summary
Name: Pparg::Rxra
Matrix ID: MA0065.3
Class: Nuclear
Family: Thyroid::RXR-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 18981474
Uniprot ID: P28700   P37238  
Source:
Comment: Heterodimer

Sequence logo

Frequency matrix

         
A [ 81 109 479 120 12 9 23 8 66 193 34 87 79 ]
C [ 47 144 263 693 767 137 270 15 179 395 674 671 368 ]
G [ 58 555 99 9 2 5 48 21 547 129 15 3 23 ]
T [ 676 54 22 41 82 713 522 819 71 145 139 100 390 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0065.1 MA0065 1 PPARG::RXRA Homo sapiens
Thyroid::RXR-related Nuclear
MA0065.2 MA0065 2 Pparg::Rxra Mus musculus
Thyroid::RXR-related Nuclear
MA0065.3 MA0065 3 Pparg::Rxra Mus musculus
Thyroid::RXR-related Nuclear
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: