Detailed information of matrix profile MA0065.1

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Profile summary
Name: PPARG::RXRA
Matrix ID: MA0065.1
Class: Nuclear
Family: Thyroid::RXR-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SELEX
Validation: 11139380
Uniprot ID: P19793   P37231  
Source:
Comment: Heterodimer

Sequence logo

Frequency matrix

         
A [ 10 7 19 13 17 0 0 0 2 41 41 39 0 0 0 2 38 10 13 7 ]
C [ 12 13 4 1 0 0 0 2 37 0 0 0 0 0 2 36 1 12 15 10 ]
G [ 7 8 6 27 24 41 39 0 2 0 0 2 41 39 0 1 2 4 9 12 ]
T [ 12 13 12 0 0 0 2 39 0 0 0 0 0 2 39 2 0 15 4 12 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0065.1 MA0065 1 PPARG::RXRA Homo sapiens
Thyroid::RXR-related Nuclear
MA0065.2 MA0065 2 Pparg::Rxra Mus musculus
Thyroid::RXR-related Nuclear
MA0065.3 MA0065 3 Pparg::Rxra Mus musculus
Thyroid::RXR-related Nuclear
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: