Detailed information of matrix profile MA0005.3

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Profile summary
Name: AG
Matrix ID: MA0005.3
Class: MADS
Family: Type
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 7901838
Uniprot ID: P17839  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 9 10 29 0 0 31 47 52 25 17 19 7 2 22 45 40 ]
C [ 3 0 8 66 65 3 2 0 0 15 8 0 0 17 4 6 ]
G [ 3 1 8 0 0 6 0 1 1 11 20 57 54 5 5 9 ]
T [ 51 55 21 0 1 26 17 13 40 23 19 2 10 22 12 11 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0005.1 MA0005 1 AG Arabidopsis thaliana
Type MADS
MA0005.2 MA0005 2 AG Arabidopsis thaliana
Type MADS
MA0005.3 MA0005 3 AG Arabidopsis thaliana
Type MADS
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: