JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1553.1 RARG Homo sapiens Nuclear Thyroid
MA1553.2 RARG Homo sapiens Nuclear Thyroid
MA1554.1 RFX7 Homo sapiens Fork RFX-related
MA1554.2 RFX7 Homo sapiens Fork RFX-related
MA1555.1 RXRB Homo sapiens Nuclear RXR-related
MA1556.1 RXRG Homo sapiens Nuclear RXR-related
MA1557.1 SMAD5 Homo sapiens SMAD/NF-1 SMAD
MA1558.1 SNAI1 Homo sapiens C2H2 More
MA1558.2 SNAI1 Homo sapiens C2H2 More
MA1559.1 SNAI3 Homo sapiens C2H2 More
Showing 10 profiles of page 298 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


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Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.