JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0717.2 RAX2 Homo sapiens Homeo Paired-related
MA0718.1 RAX Homo sapiens Homeo Paired-related
MA0718.2 RAX Homo sapiens Homeo Paired-related
MA0719.1 RHOXF1 Homo sapiens Homeo Paired-related
MA0719.2 RHOXF1 Homo sapiens Homeo Paired-related
MA0720.1 Shox2 Mus musculus Homeo Paired-related
MA0720.2 Shox2 Mus musculus Homeo Paired-related
MA0721.1 UNCX Homo sapiens Homeo Paired-related
MA0721.2 UNCX Homo sapiens Homeo Paired-related
MA0722.1 VAX1 Homo sapiens Homeo NK
Showing 10 profiles of page 143 from 428 pages

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Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.