JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0542.1 elt-3 Caenorhabditis elegans Other C4-GATA-related
MA0543.1 eor-1 Caenorhabditis elegans C2H2 More
MA0543.2 eor-1 Caenorhabditis elegans C2H2 More
MA0544.1 snpc-4 Caenorhabditis elegans Tryptophan Myb/SANT
MA0545.1 hlh-1 Caenorhabditis elegans Basic MyoD/ASC-related
MA0545.2 hlh-1 Caenorhabditis elegans Basic MyoD/ASC-related
MA0546.1 pha-4 Caenorhabditis elegans Fork FOX
MA0547.1 skn-1 Caenorhabditis elegans Basic Jun-related
MA0547.2 skn-1 Caenorhabditis elegans Basic Jun-related
MA0548.1 AGL15 Arabidopsis thaliana MADS Type
Showing 10 profiles of page 107 from 428 pages

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Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.