JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1992.1 Ikzf3 Mus musculus C2H2 Three-zinc
MA1992.2 Ikzf3 Mus musculus C2H2 Three-zinc
MA1993.1 Neurod2 Mus musculus Basic Tal-related
MA1993.2 Neurod2 Mus musculus Basic Tal-related
MA1994.1 Nkx2-1 Mus musculus Homeo NK
MA1994.2 Nkx2-1 Mus musculus Homeo NK
MA1995.1 Npas4 Mus musculus Basic PAS
MA1995.2 Npas4 Mus musculus Basic PAS
MA1996.1 Nr1H2 Mus musculus Nuclear Thyroid
MA1996.2 Nr1H2 Mus musculus Nuclear Thyroid
Showing 10 profiles of page 377 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.