Summary information of deep learning profile DL0001

This page shows the summary of all deep learning-derived profiles and motifs for CTCF. Please scroll down the page to browse individual datasets.

Profile summary

Name: CTCF
Profile ID: DL0001
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCODE
Number of datasets: 449
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.05 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.01 0.01 0.00 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.06 0.12 0.00 0.04 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.06 0.00 0.02 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.01 0.01 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.01 0.01 -0.00 -0.00 0.00 0.01 -0.00 0.00 0.13 0.05 0.03 0.12 0.07 -0.00 0.04 0.01 -0.00 0.00 0.00 -0.00 0.01 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.01 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
A [ ]
C [ ]
G [ ]
T [ ]

Other Motifs identified by TF-MoDISco

449 profiles found for CTCF

Display profiles


ID Name Cell line Species JASPAR ID Sequence logo
DL0001.11 CTCF myotube Homo sapiens MA0139.2
DL0001.12 CTCF HeLa-S3 Homo sapiens MA0139.2
DL0001.13 CTCF astrocyte Homo sapiens MA0139.2
DL0001.14 CTCF osteoblast Homo sapiens MA0139.2
DL0001.15 CTCF fibroblast of dermis Homo sapiens MA0139.2
DL0001.16 CTCF DND-41 Homo sapiens MA0139.2
DL0001.17 CTCF CD14-positive monocyte Homo sapiens MA0139.2
DL0001.18 CTCF A549 Homo sapiens MA0139.2
DL0001.19 CTCF A549 Homo sapiens MA0139.2
DL0001.20 CTCF B cell Homo sapiens MA0139.2
Showing 10 profiles of page 2 from 45 pages