Summary information of deep learning profile DL0001

This page shows the summary of all deep learning-derived profiles and motifs for CTCF. Please scroll down the page to browse individual datasets.

Profile summary

Name: CTCF
Profile ID: DL0001
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCODE
Number of datasets: 449
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.05 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.01 0.01 0.00 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.06 0.12 0.00 0.04 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.06 0.00 0.02 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.01 0.01 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.01 0.01 -0.00 -0.00 0.00 0.01 -0.00 0.00 0.13 0.05 0.03 0.12 0.07 -0.00 0.04 0.01 -0.00 0.00 0.00 -0.00 0.01 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.01 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
A [ ]
C [ ]
G [ ]
T [ ]

Other Motifs identified by TF-MoDISco

449 profiles found for CTCF

Display profiles


ID Name Cell line Species JASPAR ID Sequence logo
DL0001.161 CTCF HFFc6 Homo sapiens MA0139.2
DL0001.162 CTCF upper lobe of right lung Homo sapiens MA0139.2
DL0001.163 CTCF middle frontal area 46 Homo sapiens MA0139.2
DL0001.164 CTCF stomach Homo sapiens MA0139.2
DL0001.165 CTCF A549 Homo sapiens MA0139.2
DL0001.166 CTCF coronary artery Homo sapiens MA0139.2
DL0001.167 CTCF stomach Homo sapiens MA0139.2
DL0001.168 CTCF gastroesophageal sphincter Homo sapiens MA0139.2
DL0001.169 CTCF chondrocyte Homo sapiens MA0139.2
DL0001.170 CTCF MCF 10A Homo sapiens MA0139.2
Showing 10 profiles of page 17 from 45 pages