Detailed information of matrix profile UN0851.1

  1. Home
  2. Matrix > UN0851.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: C3H67
Matrix ID: UN0851.1
Class: C3H
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q5RJC5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 191 118 331 691 0 0 0 0 161 40 ]
C [ 68 155 275 225 1000 15 0 0 0 48 ]
G [ 216 48 51 75 0 0 0 10 1 0 ]
T [ 523 678 341 8 0 985 1000 990 836 911 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0851.1 UN0851 1 C3H67 Arabidopsis thaliana
C3H
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: