Detailed information of matrix profile UN0841.1

  1. Home
  2. Matrix > UN0841.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: AT2G28920
Matrix ID: UN0841.1
Class: RING
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9ZV22  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 547 933 993 993 1 1000 0 0 101 ]
C [ 77 0 0 0 0 0 0 1000 77 ]
G [ 83 18 0 6 0 0 0 0 8 ]
T [ 291 47 6 0 998 0 1000 0 813 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0841.1 UN0841 1 AT2G28920 Arabidopsis thaliana
RING
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: