Detailed information of matrix profile UN0834.1

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Profile summary

Name: AT1G74370
Matrix ID: UN0834.1
Class: C3H
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9CA76  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 449 14 145 0 116 928 72 0 14 362 290 478 493 174 348 203 174 536 304 72 ]
C [ 14 319 623 0 0 72 0 986 696 101 145 58 130 304 290 435 159 116 130 507 ]
G [ 116 116 72 101 0 0 14 0 0 130 87 43 29 232 29 58 87 87 43 58 ]
T [ 420 551 159 899 884 0 913 14 290 406 478 420 348 290 333 304 580 261 522 362 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0834.1 UN0834 1 AT1G74370 Arabidopsis thaliana
C3H
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: