Detailed information of matrix profile UN0576.1

  1. Home
  2. Matrix > UN0576.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: PITX1::TBX21
Matrix ID: UN0576.1
Class: Homeo::T-Box
Family: Paired-related::TBrain-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P78337   Q9UL17  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 12 398 396 6 1 6 14 39 3 69 196 8 400 0 68 13 ]
C [ 8 0 17 23 401 383 212 84 50 342 13 406 35 399 342 90 ]
G [ 0 4 0 0 0 2 27 13 0 38 127 0 73 0 15 4 ]
T [ 407 24 7 396 20 55 178 371 388 31 69 4 6 0 60 341 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0576.1 UN0576 1 PITX1::TBX21 Homo sapiens
Paired-related::TBrain-related Homeo::T-Box
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: