Detailed information of matrix profile UN0567.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: HOXD12::ELK3
Matrix ID: UN0567.1
Class: Homeo::Tryptophan
Family: HOX::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P35452   P41970  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 255 97 126 456 1068 52 113 748 8 83 27 9 1068 1068 228 117 295 ]
C [ 169 67 34 47 30 470 120 3 1068 1068 17 8 0 20 163 238 170 ]
G [ 280 201 25 156 9 74 433 300 122 94 1068 1068 1 0 840 134 280 ]
T [ 363 1068 1068 1068 15 597 401 16 0 0 17 13 27 342 26 578 323 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0567.1 UN0567 1 HOXD12::ELK3 Homo sapiens
HOX::Ets-related Homeo::Tryptophan
UN0567.2 UN0567 2 HOXD12::ELK3 Homo sapiens
HOX::Ets-related Homeo::Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: