Detailed information of matrix profile UN0546.1

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Profile summary

Name: GCM1::HOXB13
Matrix ID: UN0546.1
Class: GCM::Homeo
Family: GCM::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q92826   Q9NP62  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 0 0 36 117 0 36 10 18 4 21 9 23 0 0 15 ]
C [ 6 10 8 2 22 10 5 24 17 9 117 0 2 3 26 ]
G [ 45 1 9 0 0 41 99 78 22 117 66 117 117 117 25 ]
T [ 117 117 117 0 117 76 2 0 117 0 60 29 4 0 51 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0546.1 UN0546 1 GCM1::HOXB13 Homo sapiens
GCM::HOX GCM::Homeo
UN0547.1 UN0547 1 GCM1::HOXB13 Homo sapiens
GCM::HOX GCM::Homeo
UN0546.2 UN0546 2 GCM1::HOXB13 Homo sapiens
GCM::HOX GCM::Homeo
UN0547.2 UN0547 2 GCM1::HOXB13 Homo sapiens
GCM::HOX GCM::Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: