Detailed information of matrix profile UN0522.2

  1. Home
  2. Matrix > UN0522.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ETV2::TEF
Matrix ID: UN0522.2
Class: Tryptophan::Basic
Family: Ets-related::CEBP-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q10587   Q3KNT2  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 913 23 17 2020 12 314 0 2426 2426 8 837 6 0 176 52 17 ]
C [ 347 23 18 17 2426 16 472 162 23 1324 12 0 2426 2426 131 476 ]
G [ 1110 28 249 406 33 2426 6 28 6 126 156 13 17 8 2426 1950 ]
T [ 55 2426 2426 0 706 14 1953 48 0 968 1588 2426 5 0 233 231 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0522.1 UN0522 1 ETV2::TEF Homo sapiens
Ets-related::CEBP-related Tryptophan::Basic
UN0522.2 UN0522 2 ETV2::TEF Homo sapiens
Ets-related::CEBP-related Tryptophan::Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: