Detailed information of matrix profile UN0518.1

  1. Home
  2. Matrix > UN0518.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ETV2::ONECUT2
Matrix ID: UN0518.1
Class: Tryptophan::Homeo
Family: Ets-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O95948   Q3KNT2  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 272 1134 0 592 31 21 3 5 98 87 1708 9 55 33 1708 79 200 ]
C [ 560 310 1069 17 0 1708 1708 59 269 157 9 104 765 17 12 539 472 ]
G [ 381 574 120 158 21 0 8 1708 847 34 21 19 53 1708 22 34 210 ]
T [ 495 69 639 1708 1708 0 0 347 494 1708 71 1708 943 38 0 1169 826 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0518.1 UN0518 1 ETV2::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan::Homeo
UN0519.1 UN0519 1 ETV2::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan::Homeo
UN0518.2 UN0518 2 ETV2::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan::Homeo
UN0519.2 UN0519 2 ETV2::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan::Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: