Detailed information of matrix profile UN0505.1

  1. Home
  2. Matrix > UN0505.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ERF::CEBPD
Matrix ID: UN0505.1
Class: Tryptophan::Basic
Family: Ets-related::CEBP-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P49716   P50548  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 663 3 1 468 4 67 110 1448 1448 0 1037 62 0 4 21 191 517 ]
C [ 254 0 1 4 1448 11 1448 20 0 636 38 14 1448 1448 127 786 667 ]
G [ 483 0 203 980 6 1448 18 13 0 51 225 0 5 5 984 662 270 ]
T [ 48 1448 1448 204 101 2 461 10 0 762 1448 1448 8 1 464 479 782 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0505.1 UN0505 1 ERF::CEBPD Homo sapiens
Ets-related::CEBP-related Tryptophan::Basic
UN0505.2 UN0505 2 ERF::CEBPD Homo sapiens
Ets-related::CEBP-related Tryptophan::Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: