Detailed information of matrix profile UN0498.1

  1. Home
  2. Matrix > UN0498.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ELK1::HOXA3
Matrix ID: UN0498.1
Class: Tryptophan::Homeo
Family: Ets-related::HOX-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O43365   P19419  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 0 469 1199 2123 0 6 2123 224 79 272 155 500 ]
C [ 0 1239 923 364 179 183 60 2123 2123 55 627 1079 ]
G [ 0 134 311 560 11 0 59 340 103 2123 1496 334 ]
T [ 0 884 131 180 2123 2123 4576 145 107 361 321 1044 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0498.1 UN0498 1 ELK1::HOXA3 Homo sapiens
Ets-related::HOX-related Tryptophan::Homeo
UN0498.2 UN0498 2 ELK1::HOXA3 Homo sapiens
Ets-related::HOX-related Tryptophan::Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: