Detailed information of matrix profile UN0477.1

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Profile summary

Name: ZF-C2H2-10
Matrix ID: UN0477.1
Class: C2H2
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2K8  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 287 318 561 128 366 238 116 660 53 123 26 38 33 895 14 148 194 166 231 266 193 223 ]
C [ 158 152 118 91 107 157 96 41 62 138 22 822 63 25 24 73 177 239 243 176 237 229 ]
G [ 261 136 129 149 341 279 486 216 28 121 20 39 55 58 11 598 346 307 274 254 254 285 ]
T [ 294 394 192 632 187 326 303 84 856 618 932 100 849 22 951 181 283 289 252 304 317 263 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0477.1 UN0477 1 ZF-C2H2-10 Ciona intestinalis
C2H2
UN0477.2 UN0477 2 ZF-C2H2-10 Ciona intestinalis
C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: