Detailed information of matrix profile UN0467.1

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Profile summary

Name: Prox-a
Matrix ID: UN0467.1
Class: Homeo
Family: HD-PROS
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2W9  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 232 285 306 316 341 280 251 37 7 8 6 708 841 234 470 273 260 200 215 225 ]
C [ 227 218 216 179 170 367 100 86 969 18 86 61 42 86 100 285 158 264 264 263 ]
G [ 266 259 257 297 320 103 432 16 10 12 9 212 85 619 299 204 296 219 214 225 ]
T [ 275 238 221 207 170 251 217 861 14 961 898 19 31 61 130 238 286 318 307 287 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0467.1 UN0467 1 Prox-a Ciona intestinalis
HD-PROS Homeo
UN0467.2 UN0467 2 Prox-a Ciona intestinalis
HD-PROS Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: