Detailed information of matrix profile UN0461.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: p53-a
Matrix ID: UN0461.1
Class: p53
Family: p53-related
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 282 227 174 169 203 155 400 82 685 6 503 30 4 10 8 48 410 281 312 215 282 240 ]
C [ 269 268 221 379 400 333 41 11 13 984 108 74 7 867 973 717 129 206 203 392 273 266 ]
G [ 210 224 434 165 152 94 512 892 288 4 65 15 986 9 6 24 321 322 311 208 229 231 ]
T [ 240 280 171 288 244 417 48 15 14 6 325 881 3 115 14 211 140 191 174 185 216 263 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0461.1 UN0461 1 p53-a Ciona intestinalis
p53-related p53
UN0461.2 UN0461 2 p53-a Ciona intestinalis
p53-related p53
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: